Program
| Time |
Event |
|
|
08:00 - 08:45
|
Participants welcoming - Participants welcoming |
|
|
08:45 - 09:00
|
Workshop opening - Dominique Joly, Guy Perrière |
|
|
09:00 - 09:30
|
Spotlight on the Thaumarcheota - Céline Brochier-Armanet |
|
|
09:30 - 09:50
|
Depicting the microbial diversity from high-throughput sequencing amplicons: a phylogenetic approach - Najwa Taib |
|
|
09:50 - 10:10
|
RADseq, phylogenies and estimation of genetic diversity - Marie Cariou |
|
|
10:10 - 10:30
|
Empirical assessment of RAD sequencing for interspecific phylogeny - Astrid Cruaud |
|
|
10:30 - 11:00
|
Coffee break |
|
|
11:00 - 11:20
|
Robust estimation of phylogenetic diversity: steer clear of rare species - Thibault Latrille |
|
|
11:20 - 11:40
|
Co-phylogeny reconstruction via an Approximate Bayesian Computation - Christian Baudet |
|
|
11:40 - 12:00
|
Examining the bacterial diversity of oligotrophic soil environments using metagenomic approaches - Michael DuBow |
|
|
12:00 - 12:20
|
Bioenergetic use of arsenic in haloarchaea revealed by metagenomic analysis - Nicolas Rascovan |
|
|
12:20 - 12:40
|
SortMeRNA 2: ribosomal RNA classification for taxonomic assignation - Hélène Touzet |
|
|
12:40 - 14:00
|
Lunch and posters |
|
|
14:00 - 14:30
|
The use of metabarcoding in monitoring of biological diversity: some notes on complementarity and validation - Nigel Gilles Yoccoz |
|
|
14:30 - 14:50
|
GnS-PIPE: an optimized bionformatic pipeline to efficiently assess microbial taxonomic diversity of complex environments using high throughput sequencing technologies - Sébastien Terrat |
|
|
14:50 - 15:10
|
High-throughput molecular ecology of carabid beetles: trophic interactions and pest control - Stefaniya Kamenova |
|
|
15:10 - 15:30
|
Protist community structure in coastal arctic environments: does ocean acidification affect marine microbes? - Lucie Bittner |
|
|
15:30 - 15:50
|
Evidence for a core bacterial microbiota among geographically and genetically different populations of the tiger mosquito Aedes albopictus - Guillaume Minard |
|
|
15:50 - 16:10
|
Toward solving the mystery of 'chameleon' cyanobacteria - Laurence Garczarek |
|
|
16:10 - 16:40
|
Coffee break |
|
|
16:40 - 17:00
|
Non invasive identification of past oral microbial flora - Olivier Gorgé |
|
|
17:00 - 17:20
|
The Arctic snowpack microbial community highlighted by metagenomics and metatranscriptomics - Lorrie Maccario |
|
|
17:20 - 17:40
|
Rhizosphere heterogeneity shapes abundance and activity of sulfur-oxidizing bacteria in vegetated salt marsh sediments - François Thomas |
|
|
17:40 - 19:30
|
Poster session - Poster session |
|
|
19:30 - 21:30
|
Buffet dinner |
|
| Time |
Event |
|
|
09:00 - 09:30
|
High-throughput molecular barcoding as a tool for assessment and monitoring the environmental impact associated with aquaculture - Jan Pawlowski |
|
|
09:30 - 09:50
|
Speciation, hybridization, and introgression among three closely-related butterfly species in the Alps - Thibaut Capblancq |
|
|
09:50 - 10:10
|
Comparative Pop(pool)ation genomics of two chronotypes of the metazoan parasite Schistosoma mansoni: insights into adaptation to a new host - Eve Toulza |
|
|
10:10 - 10:30
|
Genome analyses of symbiont-bearing trypanosomatids indicate that the bacterium is essential for amino acid and vitamin production - Cecilia Coimbra Klein |
|
|
10:30 - 11:00
|
Coffee break |
|
|
11:00 - 11:20
|
RecStat: a set of R utilities for Coding DNA Sequences prediction in metagenomes - Guy Perrière |
|
|
11:20 - 11:40
|
UrQt: unsupervised quality trimming for NGS data - Laurent Modolo |
|
|
11:40 - 12:00
|
MacSyFinder: mining genomes for molecular systems - Sophie Abby |
|
|
12:00 - 12:20
|
De novo transcriptome assembly for a non model species, the blood-sucking bug Triatoma brasiliensis, a vector of Chagas disease - Axelle Marchant |
|
|
12:20 - 12:40
|
A framework for identifying sex-linked genes using RNAseq data - Aline Muyle |
|
|
12:40 - 14:00
|
Lunch and posters |
|
|
14:00 - 14:30
|
Wolbachia through time: palaeosymbiology - Mark Blaxter |
|
|
14:30 - 14:50
|
Metabolic response of a planktonic ecosystem to environmental perturbation - Amos Kirilovsky |
|
|
14:50 - 15:10
|
What are the most abundant genes in marine plankton? - Magali Lescot |
|
|
15:10 - 15:30
|
Use of single cell amplified genome and metatranscriptomics to survey Pelagomonas calceolata metabolism - Bonora Mario Neou |
|
|
15:30 - 15:40
|
Closing ceremony - End of the workshop |
|
|
