Tuesday, May 27, 2014
Time | Event | |
08:00 - 08:45 | Participants welcoming - Participants welcoming | |
08:45 - 09:00 | Workshop opening - Dominique Joly, Guy Perrière | |
09:00 - 09:30 | Spotlight on the Thaumarcheota - Céline Brochier-Armanet | |
09:30 - 09:50 | Depicting the microbial diversity from high-throughput sequencing amplicons: a phylogenetic approach - Najwa Taib | |
09:50 - 10:10 | RADseq, phylogenies and estimation of genetic diversity - Marie Cariou | |
10:10 - 10:30 | Empirical assessment of RAD sequencing for interspecific phylogeny - Astrid Cruaud | |
10:30 - 11:00 | Coffee break | |
11:00 - 11:20 | Robust estimation of phylogenetic diversity: steer clear of rare species - Thibault Latrille | |
11:20 - 11:40 | Co-phylogeny reconstruction via an Approximate Bayesian Computation - Christian Baudet | |
11:40 - 12:00 | Examining the bacterial diversity of oligotrophic soil environments using metagenomic approaches - Michael DuBow | |
12:00 - 12:20 | Bioenergetic use of arsenic in haloarchaea revealed by metagenomic analysis - Nicolas Rascovan | |
12:20 - 12:40 | SortMeRNA 2: ribosomal RNA classification for taxonomic assignation - Hélène Touzet | |
12:40 - 14:00 | Lunch and posters | |
14:00 - 14:30 | The use of metabarcoding in monitoring of biological diversity: some notes on complementarity and validation - Nigel Gilles Yoccoz | |
14:30 - 14:50 | GnS-PIPE: an optimized bionformatic pipeline to efficiently assess microbial taxonomic diversity of complex environments using high throughput sequencing technologies - Sébastien Terrat | |
14:50 - 15:10 | High-throughput molecular ecology of carabid beetles: trophic interactions and pest control - Stefaniya Kamenova | |
15:10 - 15:30 | Protist community structure in coastal arctic environments: does ocean acidification affect marine microbes? - Lucie Bittner | |
15:30 - 15:50 | Evidence for a core bacterial microbiota among geographically and genetically different populations of the tiger mosquito Aedes albopictus - Guillaume Minard | |
15:50 - 16:10 | Toward solving the mystery of 'chameleon' cyanobacteria - Laurence Garczarek | |
16:10 - 16:40 | Coffee break | |
16:40 - 17:00 | Non invasive identification of past oral microbial flora - Olivier Gorgé | |
17:00 - 17:20 | The Arctic snowpack microbial community highlighted by metagenomics and metatranscriptomics - Lorrie Maccario | |
17:20 - 17:40 | Rhizosphere heterogeneity shapes abundance and activity of sulfur-oxidizing bacteria in vegetated salt marsh sediments - François Thomas | |
17:40 - 19:30 | Poster session - Poster session | |
19:30 - 21:30 | Buffet dinner |
Wednesday, May 28, 2014
Time | Event | |
09:00 - 09:30 | High-throughput molecular barcoding as a tool for assessment and monitoring the environmental impact associated with aquaculture - Jan Pawlowski | |
09:30 - 09:50 | Speciation, hybridization, and introgression among three closely-related butterfly species in the Alps - Thibaut Capblancq | |
09:50 - 10:10 | Comparative Pop(pool)ation genomics of two chronotypes of the metazoan parasite Schistosoma mansoni: insights into adaptation to a new host - Eve Toulza | |
10:10 - 10:30 | Genome analyses of symbiont-bearing trypanosomatids indicate that the bacterium is essential for amino acid and vitamin production - Cecilia Coimbra Klein | |
10:30 - 11:00 | Coffee break | |
11:00 - 11:20 | RecStat: a set of R utilities for Coding DNA Sequences prediction in metagenomes - Guy Perrière | |
11:20 - 11:40 | UrQt: unsupervised quality trimming for NGS data - Laurent Modolo | |
11:40 - 12:00 | MacSyFinder: mining genomes for molecular systems - Sophie Abby | |
12:00 - 12:20 | De novo transcriptome assembly for a non model species, the blood-sucking bug Triatoma brasiliensis, a vector of Chagas disease - Axelle Marchant | |
12:20 - 12:40 | A framework for identifying sex-linked genes using RNAseq data - Aline Muyle | |
12:40 - 14:00 | Lunch and posters | |
14:00 - 14:30 | Wolbachia through time: palaeosymbiology - Mark Blaxter | |
14:30 - 14:50 | Metabolic response of a planktonic ecosystem to environmental perturbation - Amos Kirilovsky | |
14:50 - 15:10 | What are the most abundant genes in marine plankton? - Magali Lescot | |
15:10 - 15:30 | Use of single cell amplified genome and metatranscriptomics to survey Pelagomonas calceolata metabolism - Bonora Mario Neou | |
15:30 - 15:40 | Closing ceremony - End of the workshop |